MATra References

Technology

Bertram J (2006) MATra - Magnet Assisted Transfection: Combining Nanotechnology and Magnetic Forces to Improve Intracellular Delivery of Nucleic Acids. Current Pharmaceutical Biotechnology 7:277-85.

Applications

Hepatocytes

Matsui K, Nishizawa M, Ozaki T, Kimura T, Hashimoto I, Yamada M, Kaibori M, Kamiyama Y, Ito S, Okumura T (2008) Natural antisense transcript stabilizes inducible nitric oxide synthase messenger  RNA in rat hepatocytes. Hepatology 48(2):289-299.

Habara K, Hamada Y, Yamada M, Tokuhara K, Tanaka H, Kaibori M, Kamiyama Y, Nishizawa M, Ito S, Okumura T (2008) Pitavastatin up-regulates the induction of iNOS through enhanced stabilization of its mRNA in pro-inflammatory cytokine-stimulated hepatocytes. Nitric Oxide 18(1):19-27.

Tanaka H, Uchida Y, Kaibori M, Hijikawa T, Ishizaki M, Yamada M, Matsui K, Ozaki T, Tokuhara K, Kamiyama Y, Nishizawa M, Ito S, Okumura T (2008) Na+/H+ exchanger inhibitor, FR183998, has protective effect in lethal acute liver failure and prevents iNOS induction in rats. Journal of Hepatology 48(2):289-99.

Ozaki T, Kaibori M, Matsui K, Tokuhara K, Tanaka H, Kamiyama Y, Nishizawa M, Ito S, Okumura T (2007) Effect of thiol-containing molecule cysteamine on the induction of inducible nitric oxide synthase in hepatocytes. Journal of Parenteral and Enteral Nutrition 31(5):366-71.

Neurosciences

Gralle M, Botelho MG, Wouters FS (2009) Neuroprotective secreted amyloid precursor protein acts by disrupting amyloid precursor protein dimers. The Journal of Biological Chemistry 284(22):15016-25. (B103 neuroblastoma cells)

Luo W, Wang Y, Reiser G (2007) p24A, a type I transmembrane protein, controls ARF1-dependent resensitization of protease-activated receptor-2 by influence on receptor trafficking. The Journal of Biological Chemistry 282(41):30246-55. (primary rat astrocytes)

Frei E, Spindler I, Grissmer S, Jäger H (2006) Interactions of N-terminal and C-terminal parts of the small conductance Ca2+ activated K+ channel, hSK3. Cellular Physiology and Biochemistry 18(4-5):165-76. (PC12 cells)

Liman J, Ganesan S, Dohm CP, Krajewski S, Reed JC, Bähr M, Wouters FS and Kermer P (2005) Interaction of BAG1 and Hsp70 Mediates Neuroprotectivity and Increases Chaperone Activity. Molecular and Cellular Biology 25(9): 3715-25. (SHSY-5Y and CSM14.1 cells)

HEK293 cells

Maetzel D, Denzel S, Mack B, Canis M, Went P, Benk M, Kieu C, Papior P, Baeuerle PA, Munz M, Gires O (2009) Nuclear signalling by tumour-associated antigen EpCAM. Nature Cell Biology 11(2):162-71.

Petrovic M, Sedlacek M, Cais O, Horak M, Chodounska H, Vyklicky L Jr (2009) Pregnenolone sulfate modulation of N-methyl-D-aspartate receptors is phosphorylation dependent. Neuroscience 160(3):616-28.

Hiss JA, Resch E, Schreiner A, Meissner M, Starzinski-Powitz A, Schneider G (2008) Domain organization of long signal peptides of single-pass integral membrane proteins reveals multiple functional capacity. PLoS One 3(7):e2767.

Bienkowska-Haba M, Patel HD, Sapp M (2009) Target cell cyclophilins facilitate human papillomavirus type 16 infection. PLoS Pathogens 5(7):e1000524. (siRNA)

Kitzing TM, Sahadevan AS, Brandt DT, Knieling H, Hannemann S, Fackler OT, Großhans J, Grosse R (2007) Positive feedback between Dia1, LARG, and RhoA regulates cell morphology and invasion. Genes & Development 21:1478-83.
Access the most recent version at doi:10.1101/gad.424807
Supplementary data: http://www.genesdev.org/cgi/content/full/21/12/1478/DC1 (siRNA)

Luo W, Wang Y, Reiser G (2007) p24A, a type I transmembrane protein, controls ARF1-dependent resensitization of protease-activated receptor-2 by influence on receptor trafficking. The Journal of Biological Chemistry 282(41):30246-55. (siRNA and plasmid DNA)

Other kidney cells

Schreiner A, Ruonala M, Jakob V, Suthaus J, Boles E, Wouters F, Starzinski-Powitz A (2007) Junction Protein Shrew-1 Influences Cell Invasion and Interacts with Invasion-promoting Protein CD147 Molecular Biology of the Cell 18:1272–81. (MDCK cells)

Maetzel D, Denzel S, Mack B, Canis M, Went P, Benk M, Kieu C, Papior P, Baeuerle PA, Munz M, Gires O (2009) Nuclear signalling by tumour-associated antigen EpCAM. Nature Cell Biology 11(2):162-71. (NIH3T3 cells)

Daniel S, Bradley G, Longshaw VM, Söti C, Csermely P, Blatch GL (2008) Nuclear translocation of the phosphoprotein Hop (Hsp70/Hsp90 organizing protein) occurs under heat shock, and its proposed nuclear localization signal is involved in Hsp90 binding. Biochimica et Biophysica Acta 1783(6):1003-14. (BHK-21 cells) (IBAfect + MA Lipofection Enhancer)

Jakob V, Schreiner A, Tikkanen R, Starzinski-Powitz A (2006) Targeting of transmembrane protein shrew-1 to adherens junctions is controlled by cytoplasmic sorting motifs. Molecular Biology of the Cell 17(8):3397-408. (MDCK cells, LLC-PK1 cells)

Fibroblasts

Khobta A, Kitsera N, Speckmann B, Epe B (2009) 8-Oxoguanine DNA glycosylase (Ogg1) causes a transcriptional inactivation of damaged DNA in the absence of functional Cockayne syndrome B (Csb) protein. DNA Repair 8(3):309-17. (MEF cell lines)

Goulimari P, Knieling H, Engel U, Grosse R (2008) LARG and mDia1 link Galpha12/13 to cell polarity and microtubule dynamics. Molecular Biology of the Cell 19(1):30-40. (siRNA, MEFs)

Hegele H, Wuepping M, Ref C, Kenner O, Kaufmann D (2008) Simultaneous targeted exchange of two nucleotides by single-stranded oligonucleotides clusters within a region of about fourteen nucleotides. BMC Molecular Biology 9:14. (ssDNA, V79 cells)

HeLa Cells

Schaffrik M, Mack B, Matthias C, Rauch J, Gires O (2006) Molecular characterization of the tumor-associated antigen AAA-TOB3. Cellular and Molecular Life Sciences 63(18):2162-74. (siRNA and plasmid DNA)

Schreiner A, Ruonala M, Jakob V, Suthaus J, Boles E, Wouters F, Starzinski-Powitz A (2007) Junction Protein Shrew-1 Influences Cell Invasion and Interacts with Invasion-promoting Protein CD147 Molecular Biology of the Cell 18:1272–81.

Hoeller D, Crosetto N, Blagoev B, Raiborg C, Tikkanen R, Wagner S, Kowanetz K, Breitling R, Mann M, Stenmark H, Dikic I (2006) Regulation of ubiquitin-binding proteins by monoubiquitination. Nature Cell Biology 8(2):163-9.

Ghogomu SM, van Venrooy S, Ritthaler M, Wedlich D, Gradl D (2006) The Journal of Biological Chemistry 281(3):1755-64.

Carcinoma cells

Kumbrink J, Gerlinger M, Johnson JP (2005) Egr-1 induces the expression of its corepressor nab2 by activation of the nab2 promoter thereby establishing a negative feedback loop. The Journal of Biological Chemistry 280(52):42785-93. (5 different cell lines)

Schreiner A, Ruonala M, Jakob V, Suthaus J, Boles E, Wouters F, Starzinski-Powitz A (2007) Junction Protein Shrew-1 Influences Cell Invasion and Interacts with Invasion-promoting Protein CD147 Molecular Biology of the Cell 18:1272–81. (MCF-7 cells, HT1080 cells)

Gellersen B, Briese J, Oberndörfer M, Redlin K, Samalecos A, Richter DU, Löning T, Schulte HM, Bamberger AM (2007) Expression of the metastasis suppressor KAI1 in decidual cells at the human maternal-fetal interface: Regulation and functional implications. American Journal of Pathology 170(1):126-39. (MDA-MB-231 cells) (MA Lipofection Enhancer)

Maetzel D, Denzel S, Mack B, Canis M, Went P, Benk M, Kieu C, Papior P, Baeuerle PA, Munz M, Gires O (2009) Nuclear signalling by tumour-associated antigen EpCAM. Nature Cell Biology 11(2):162-71. (siRNA, FaDu cells (squamous cell carcinoma) and HCT-8 colon carcinoma cells)

Spee B, Jonkers MD, Arends B, Rutteman GR, Rothuizen J, Penning LC (2006) Specific down-regulation of XIAP with RNA interference enhances the sensitivity of canine tumor cell-lines to TRAIL and doxorubicin. Molecular Cancer 5:34-43. (bile-duct epithelia (primary cells), mammary carcinoma (P114), osteosarcoma (D17)) (siRNA, MA Lipofection Enhancer)

Schaffrik M, Mack B, Matthias C, Rauch J, Gires O (2006) Molecular characterization of the tumor-associated antigen AAA-TOB3. Cellular and Molecular Life Sciences 63(18):2162-74. (siRNA and plasmid DNA, head and neck carcinoma cells)

Others

Bienkowska-Haba M, Patel HD, Sapp M (2009) Target cell cyclophilins facilitate human papillomavirus type 16 infection. PLoS Pathogens 5(7):e1000524. (siRNA, HaCaT keratinocytes)

Gellersen B, Briese J, Oberndörfer M, Redlin K, Samalecos A, Richter DU, Löning T, Schulte HM, Bamberger AM (2007) Expression of the metastasis suppressor KAI1 in decidual cells at the human maternal-fetal interface: Regulation and functional implications. American Journal of Pathology 170(1):126-39. (siRNA, primary endometrial stromal cells)

Pfrommer CA, Erl W, Weber PC (2006) Docosahexaenoic acid induces ciap1 mRNA and protects human endothelial cells from stress-induced apoptosis. American Journal of Physiology - Heart and Circulatory Physiology 290(6):H2178-86. (HUVEC cells)

Liman J, Ganesan S, Dohm CP, Krajewski S, Reed JC, Bähr M, Wouters FS and Kermer P (2005) Interaction of BAG1 and Hsp70 Mediates Neuroprotectivity and Increases Chaperone Activity. Molecular and Cellular Biology 25(9): 3715-25. (CHO cells)

Bobak N, Agoston Z, Schulte D (2009) Evidence against involvement of Bmp receptor 1b signaling in fate specification of the chick mesencephalic alar plate at HH16. Neuroscience Letters 461(3):223-8. (E10 mouse limb mesenchymal cells, micromass culture)

Kern J, Bauer M, Rychli K, Wojta J, Ritsch A, Gastl G, Gunsilius E, Untergasser G (2008) Alternative splicing of vasohibin-1 generates an inhibitor of endothelial cell proliferation, migration, and capillary tube formation. Arteriosclerosis, Thrombosis, and Vascular Biology 28(3):478-84. (HUVEC cells and endothelial colony forming cells (ECFCs))